オカレンス(観察データと標本)

Centre for Biodiversity Genomics (BIOUG) - Marine Invertebrates

最新バージョン University of Guelph によって公開 2017/04/21 University of Guelph
公開日:
2017/04/21
ライセンス:
CC0 1.0

DwC-A形式のリソース データまたは EML / RTF 形式のリソース メタデータの最新バージョンをダウンロード:

DwC ファイルとしてのデータ ダウンロード 3,464 レコード English で (189 KB) - 更新頻度: as needed
EML ファイルとしてのメタデータ ダウンロード English で (15 KB)
RTF ファイルとしてのメタデータ ダウンロード English で (13 KB)

説明

The Centre for Biodiversity Genomics (BIOUG) will be releasing data on marine invertebrates to the public domain as the data is published in peer-reviewed journals. Every specimen in the resource is digitized, and the exact storage location of each specimen is tracked in a collection management information system for quick reference and retrieval. The databased information for every voucher is also archived in the Barcode of Life Data System (BOLD), permitting the permanent storage, validation and analysis of barcode sequence data and associated specimen metadata. As of April 2017, this resource contains specimen information from the following resources: 1. Carr, C. M., Hardy, S. M., Brown, T. M., Macdonald, T. A., & Hebert, P. D. N. (2011). A tri-oceanic perspective: DNA barcoding reveals geographic structure and cryptic diversity in Canadian polychaetes. PLoS One, 6(7), e22232. 2. Layton, K. K., Martel, A. L., & Hebert, P. D. N. (2014). Patterns of DNA barcode variation in Canadian marine molluscs. PLoS One, 9(4), e95003.

データ レコード

この オカレンス(観察データと標本) リソース内のデータは、1 つまたは複数のデータ テーブルとして生物多様性データを共有するための標準化された形式であるダーウィン コア アーカイブ (DwC-A) として公開されています。 コア データ テーブルには、3,464 レコードが含まれています。

この IPT はデータをアーカイブし、データ リポジトリとして機能します。データとリソースのメタデータは、 ダウンロード セクションからダウンロードできます。 バージョン テーブルから公開可能な他のバージョンを閲覧でき、リソースに加えられた変更を知ることができます。

バージョン

次の表は、公にアクセス可能な公開バージョンのリソースのみ表示しています。

引用方法

研究者はこの研究内容を以下のように引用する必要があります。:

Telfer A, deWaard J (2017): Centre for Biodiversity Genomics (BIOUG) - Marine Invertebrates. v1.1. University of Guelph. Dataset/Occurrence. http://data.canadensys.net/ipt/resource?r=cbg_marine&v=1.1

権利

研究者は権利に関する下記ステートメントを尊重する必要があります。:

パブリッシャーとライセンス保持者権利者は University of Guelph。 To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0). Users may copy, modify, distribute and use the work, including for commercial purposes, without restriction.

GBIF登録

このリソースをはGBIF と登録されており GBIF UUID: 5ca5f0b6-d221-4f69-b7ac-8579180942b5が割り当てられています。   Canada Biodiversity Information Facility によって承認されたデータ パブリッシャーとして GBIF に登録されているUniversity of Guelph が、このリソースをパブリッシュしました。

キーワード

Occurrence; Specimen

連絡先

Angela Telfer
  • メタデータ提供者
  • 最初のデータ採集者
Data Management Lead - Collections
Centre for Biodiversity Genomics, University of Guelph
50 Stone Road East
N1G 2W1 Guelph
Ontario
CA
519-824-4120 ext.58125
Jeremy deWaard
  • データ所有者
  • メタデータ提供者
  • 最初のデータ採集者
  • 連絡先
Associate Director – Collections
Centre for Biodiversity Genomics, University of Guelph
50 Stone Road East
N1G 2W1 Guelph
Ontario
CA
519-824-4120 ext. 52258

地理的範囲

The majority of the records included in this resource were collected in Canada, with the remainder collected in Florida (United States of America) and Greenland. Detailed collection information for each resource include the field id, location and latitude and longitude are included for each record.

座標(緯度経度) 南 西 [25.93, -169.26], 北 東 [83.93, -6.52]

生物分類学的範囲

All specimens were identified to the lowest level of taxonomy possible, using a combination of morphological identification and taxonomic assignment based on DNA barcode sequence similarity.

Phylum Annelida, Cnidaria, Mollusca

時間的範囲

開始日 / 終了日 1999-07-27 / 2011-10-17

収集方法

Carr, C. M., Hardy, S. M., Brown, T. M., Macdonald, T. A., & Hebert, P. D. N. (2011). A tri-oceanic perspective: DNA barcoding reveals geographic structure and cryptic diversity in Canadian polychaetes. PLoS One, 6(7), e22232. "A total of 2324 polychaetes were collected (detailed specimen information is available in the “Polychaetes of North America (PONA)” project on BOLD; www.barcodinglife.org [35]) between 1999 and 2009 from eight locations in Canada and Alaska. These sites included Bamfield (British Columbia; n = 553), Bering Sea (Alaska; n = 137), Chukchi Sea (Alaska; n = 26), Churchill (Manitoba; n = 864), Resolute (Nunavut; n = 167), Igloolik (Nunavut; n = 91), Torngat Mountains National Park (Newfoundland and Labrador; n = 77), and St. Andrews (New Brunswick; n = 409). Samples from most sites were collected in the intertidal zone or from nearshore coastal habitats using subtidal dredges, diving, and plankton tows. Bering and Chukchi Sea samples were obtained from ship-based sampling in offshore waters (40–60 m water depth) using a van Veen grab and a plumb-staff beam trawl with 4 mm mesh. Samples were sieved on 1 and 0.5 mm mesh. Whenever possible, multiple specimens of each morphospecies were collected. Specimens were fixed in either 70 or 90% ethanol, which was replaced at least three times to prevent dilution, and preserved in 95% ethanol." Layton, K. K., Martel, A. L., & Hebert, P. D. N. (2014). Patterns of DNA barcode variation in Canadian marine molluscs. PLoS One, 9(4), e95003. "A total of 2352 specimens were collected from 1999 to 2012 at sites across Canada (Figure 1). One quarter (666) of these specimens were collected from Alaska, Greenland and Iceland, although species found in these locations also exist in Canadian waters. ... When possible, five specimens per species were collected from intertidal or subtidal habitats using plankton nets, small dredges, and SCUBA diving, but samples from the Beaufort Sea were collected from deep subtidal soft-bottom habitats using an Agassiz trawl. Specimens were immediately fixed in 90–100% ethanol, with subsequent replacement of ethanol to prevent its dilution. During fixation, the opercula of gastropods were removed, and the shells of bivalves were separated to ensure preservation of internal tissues. After each collecting trip, specimens were placed in fresh 95% ethanol and stored at −20°C."

Study Extent Please review the referenced papers for study extent.
Quality Control All specimens are visible on BOLD (www.boldsystems.org). Through comparison with other specimens using their DNA barcode sequences, contaminated specimens and misidentifications were discovered and fixed where possible. Fields underwent a data cleansing process to ensure data were entered in a standardized matter.

Method step description:

  1. Please review the referenced papers for step description.

コレクションデータ

コレクション名 Centre for Biodiversity Genomics
コレクション識別子 BIOUG
標本保存方法 Alcohol

追加のメタデータ

All data included in this release are publicly available on the Barcode of Life Data Systems (BOLD; www.boldsystems.org). Each specimen is also linked to a COI DNA barcode deposited in GenBank at the National Center for Biotechnology Information (NCBI; http://www.ncbi.nlm.nih.gov/genbank/).

目的 To present in one resource the published marine invertebrate data archived at the Centre for Biodiversity Genomics (BIOUG) of the University of Guelph.
メンテナンス内容 The resource will be updated as needed, when significant changes to the original resource have developed or additional publications have come to the attention of the resource creator.
代替識別子 http://data.canadensys.net/ipt/resource?r=cbg_marine