出現紀錄

Comparison of Environmental DNA and SCUBA Diving Methods to Survey Keystone Rockfish Species on the Central Coast of British Columbia, Canada

最新版本 由 University of Victoria 發佈於 2024年6月10日 University of Victoria
發布日期:
2024年6月10日
Published by:
University of Victoria
授權條款:
CC0 1.0

下載最新版本的 Darwin Core Archive (DwC-A) 資源,或資源詮釋資料的 EML 或 RTF 文字檔。

DwC-A資料集 下載 1,211 紀錄 在 English 中 (35 KB) - 更新頻率: 有可能更新,但不確知何時
元數據EML檔 下載 在 English 中 (27 KB)
元數據RTF文字檔 下載 在 English 中 (11 KB)

說明

Within this work we address the relevance of integrating molecular techniques; particularly environmental DNA (eDNA) methods into biological monitoring programs. We focused on the Sebastes genus; a group of important fish in the Pacific Northwest of North America. They are particularly interesting from an evolutionary standpoint due to a high degree of interspecific sequence conservation paired with a high degree of intraspecific sequence variability. We used a novel whole mitochondrial genome approach to overcome these challenges and create successful targeted qPCR eDNA assays for species of particular importance. We also used a metabarcoding approach to compare molecular community diversity estimates with those made by conventional diving methods. We found that molecular techniques were highly sensitive and could detect more species overall. However, both molecular and conventional methods have their strengths. In terms of species and habitat protection, using multiple techniques together will be most impactful.

This data was collected in the territory of the Kitasoo/X'ais x'ais First Nation with the logistical support and permission of the Kitasoo/X'ais x'ais Stewardship Authority. If you download or use this data for any purpose please contact Christina Service the Wildlife Biologist and Science Coordinator at research@kxsa.ca.

[This dataset was processed using the GBIF eDNA converter tool.]

資料紀錄

此資源出現紀錄的資料已發佈為達爾文核心集檔案(DwC-A),其以一或多組資料表構成分享生物多樣性資料的標準格式。 核心資料表包含 1,211 筆紀錄。

亦存在 1 筆延伸集的資料表。延伸集中的紀錄補充核心集中紀錄的額外資訊。 每個延伸集資料表中資料筆數顯示如下。

Occurrence (核心)
1211
dnaDerivedData 
1211

此 IPT 存放資料以提供資料儲存庫服務。資料與資源的詮釋資料可由「下載」單元下載。「版本」表格列出此資源的其它公開版本,以便利追蹤其隨時間的變更。

版本

以下的表格只顯示可公開存取資源的已發布版本。

如何引用

研究者應依照以下指示引用此資源。:

Helbing C, Acharya-Patel N, Groenwold E, A. Lemay M, Clemente - Carvalho R, Morien E, Dudas S, Rubidge E, Lingyu Yang C, Coombe L, Warren R, Birol I, Frid A (2024). Comparison of Environmental DNA and SCUBA Diving Methods to Survey Keystone Rockfish Species on the Central Coast of British Columbia, Canada. Version 1.1. University of Victoria. Occurrence dataset. https://doi.org/10.5886/ekxjiu

權利

研究者應尊重以下權利聲明。:

此資料的發布者及權利單位為 University of Victoria。 To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0). Users may copy, modify, distribute and use the work, including for commercial purposes, without restriction.

GBIF 註冊

此資源已向GBIF註冊,並指定以下之GBIF UUID: d90cfe48-fe51-4206-b29d-f4c5cb67fa4a。  University of Victoria 發佈此資源,並經由Canada Biodiversity Information Facility同意向GBIF註冊成為資料發佈者。

關鍵字

Occurrence

聯絡資訊

Caren Helbing
  • 元數據提供者
  • 出處
  • 連絡人
Professor
University of Victoria
3800 Finnerty Road
Victoria
British Columbia
CA
Neha Acharya-Patel
  • 出處
  • 連絡人
Ph.D. Candidate
Department of Biochemistry and Microbiology, University of Victoria
V8P 5C2 Victoria
British Columbia
CA
Emma Groenwold
  • 出處
  • 連絡人
Ph.D. Candidate
McGill University
845 Sherbrooke West
H3A 2T5 Montréal
Québec
CA
Matthew A. Lemay
  • 出處
  • 連絡人
Research Scientist
Hakai Research Institute
V9W 0B7 Campbell River
British Columbia
CA
Rute Clemente - Carvalho
  • 出處
  • 連絡人
Genomics Lab Manager
Hakai Research Institute
V9W 0B7 Campbell River
British Columbia
CA
Evan Morien
  • 出處
  • 連絡人
Bioinformatician
Hakai Research Institute
V9W 0B7 Campbell River
British Columbia
CA
Sarah Dudas
  • 出處
  • 連絡人
Biologist
Fisheries and Oceans Canada
V9T 6N7 Nanaimo
British Columbia
CA
Emily Rubidge
  • 出處
  • 連絡人
Biologist
Fisheries and Oceans Canada
V8L4B2 Sidney
British Columbia
CA
Cecilia Lingyu Yang
  • 出處
  • 連絡人
Graduate Student
Canada’s Michael Smith Genome Sciences Centre, BC Cancer Agency
V5Z 4S6 Vancouver
British Columbia
CA
Lauren Coombe
  • 出處
  • 連絡人
Assistant Bioinformatics Coordinator
Canada’s Michael Smith Genome Sciences Centre, BC Cancer Agency
V5Z 4S6 Vancouver
British Columbia
CA
Rene Warren
  • 出處
  • 連絡人
Group Leader, Bioinformatics Technology Lab
Canada’s Michael Smith Genome Sciences Centre, BC Cancer Agency
V5Z 4S6 Vancouver
British Columbia
CA
Inanc Birol
  • 出處
  • 連絡人
Distinguished Scientist
Canada’s Michael Smith Genome Sciences Centre, BC Cancer Agency
V5Z 4S6 Vancouver
British Columbia
CA
Alejandro Frid
  • 出處
  • 連絡人
Biologist
Alejandro Frid Ecological Research
V0N 1G1 Bowen Island
British Columbia
CA

地理涵蓋範圍

British Columbia, Canada

界定座標範圍 緯度南界 經度西界 [52.43, -129.45], 緯度北界 經度東界 [52.84, -127.96]

分類群涵蓋範圍

N/A

Kingdom Animalia
Phylum Chordata
Class Actinopterygii
Order Scorpaeniformes
Family Sebastidae

額外的詮釋資料

替代的識別碼 10.5886/ekxjiu
d90cfe48-fe51-4206-b29d-f4c5cb67fa4a
https://data.canadensys.net/ipt/resource?r=edna-rockfish-uvic